Article

  • The EMBO Journal (2008) 27, 1596 - 1608
  • doi:10.1038/emboj.2008.87

Published online: 8 May 2008

3' adenylation determines mRNA abundance and monitors completion of RNA editing in T. brucei mitochondria

Ronald D Etheridge1, Inna Aphasizheva1, Paul D Gershon2 and Ruslan Aphasizhev1

  1. Department of Microbiology and Molecular Genetics, School of Medicine, University of California, Irvine, CA, USA
  2. Department of Molecular Biology and Biochemistry, University of California, Irvine, CA, USA

Correspondence to:

Ruslan Aphasizhev, Department of Microbiology and Molecular Genetics, School of Medicine, University of California, Irvine, B240 Medical Sciences I, Irvine, CA 92697, USA. Tel.: +1 949 824 7845; Fax: +1 949 824 9394; E-mail: ruslan@uci.edu

Received 24 October 2007; Accepted 2 April 2008


Expression of the mitochondrial genome in protozoan parasite Trypanosoma brucei is controlled post-transcriptionally and requires extensive U-insertion/deletion mRNA editing. In mitochondrial extracts, 3' adenylation reportedly influences degradation kinetics of synthetic edited and pre-edited mRNAs. We have identified and characterized a mitochondrial poly(A) polymerase, termed KPAP1, and determined major polypeptides in the polyadenylation complex. Inhibition of KPAP1 expression abrogates short and long A-tails typically found in mitochondrial mRNAs, and decreases the abundance of never-edited and edited transcripts. Pre-edited mRNAs are not destabilized by the lack of 3' adenylation, whereas short A-tails are required and sufficient to maintain the steady-state levels of partially edited, fully edited, and never-edited mRNAs. The editing directed by a single guide RNA is sufficient to impose a requirement for the short A-tail in edited molecules. Upon completion of the editing process, the short A-tails are extended as (A/U) heteropolymers into structures previously thought to be long poly(A) tails. These data provide the first direct evidence of functional interactions between 3' processing and editing of mitochondrial mRNAs in trypanosomes.

  • Keywords:

    • mitochondria,
    • mRNA editing,
    • mRNA stability,
    • polyadenylation,
    • Trypanosoma