Biotechnology articles within Nature Communications

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  • Article |

    Microparticles are small vesicular structures that are shed from cellular plasma membranes. Tang and colleagues show that cells treated with chemotherapeutic drugs produce drug-containing microparticles, which can be used as anticancer agents in mice.

    • Ke Tang
    • , Yi Zhang
    •  & Bo Huang
  • Article
    | Open Access

    The ability of oleaginous fungi to produce lipids for biofuels remains untapped, in part due to a lack of genetic information required to engineer industrial strains. Zhuet al. present the genome of R. toruloides, and identify transcriptomic and proteomic changes associated with lipid production.

    • Zhiwei Zhu
    • , Sufang Zhang
    •  & Zongbao K. Zhao
  • Article |

    Calcium-sensing fluorescent proteins such as TN-XXL are valuable tools for studying cellular function but, when expressed in mice, may affect animal physiology and behaviour. The authors of this paper create transgenic mice expressing TN-XXL and show that long-term expression of TN-XXL is tolerated well.

    • Stephan Direnberger
    • , Marsilius Mues
    •  & Oliver Griesbeck
  • Article
    | Open Access

    Ganoderma lucidumis a macrofungus in traditional Chinese medicine known to produce different bioactive compounds. In this study, the genome ofG. lucidumis sequenced, making this organism a potential model system for future studies of secondary metabolic pathways and their regulation in medicinal fungi.

    • Shilin Chen
    • , Jiang Xu
    •  & Chao Sun
  • Article
    | Open Access

    Signalling inputs to neural progenitors regulate the differentiation of the stem cell pool. By analysing the mechanisms occuring during neurogenesis, Cambrayet al. report that activin is the pivotal factor regulating the differentiation of telencephalic neural precursors towards a cortical interneuron fate.

    • Serafí Cambray
    • , Charles Arber
    •  & Tristan A. Rodríguez
  • Article
    | Open Access

    Bioengineered hair follicles can be produced from embryonic follicle germ cells, but whether these follicles can interact with the surrounding tissue and function normally is unknown. Here, bioengineered hair follicles transplanted into mouse dermis make connections with the surrounding tissue and show normal hair cycles.

    • Koh-ei Toyoshima
    • , Kyosuke Asakawa
    •  & Takashi Tsuji
  • Article |

    Graphene is characterized by unique physical properties that offer substantial promise, most notably for electronic applications. Mannooret al. present a wireless graphene-based sensor for detecting bacteria on a range of biological tissues.

    • Manu S. Mannoor
    • , Hu Tao
    •  & Michael C. McAlpine
  • Article |

    Bioassays are the standard way to measure prion infectivity titres, but can be time-consuming. In this study, bioassays are compared with a modified version of the protein misfolding cyclic amplification technique with beads (PMCAb), demonstrating that PMCAb can be more precise and faster than bioassays.

    • Natallia Makarava
    • , Regina Savtchenko
    •  & Ilia V. Baskakov
  • Article
    | Open Access

    Algae show much promise in the production of biofuels owing to their high photoautotrophic biomass and lipid production rates. In this study, the draft genome ofNannochloropsis gaditanaCCMP526 and a method for the transformation of this alga are reported, facilitating the investigation of lipid synthesis and biofuel production.

    • Randor Radakovits
    • , Robert E. Jinkerson
    •  & Matthew C. Posewitz
  • Article |

    RNA can be silenced in a sequence-specific manner but whether proteins can silence RNA in this way is unknown. Now, Yamaguchi and colleagues show that an enzyme isolated fromHaloquadra walsbyi cleaves 7-base-pair sequences in Escherichia coli, and this high sequence specificity permits the silencing of targeted genes.

    • Yoshihiro Yamaguchi
    • , Hirofumi Nariya
    •  & Masayori Inouye
  • Article |

    Nanomechanical resonators are attractive as ultra-low concentration sensors of biomolecules, as their small scale allows for sensitive mass detection. Here, using a nanowire array as part of a photonic crystal, such a device is presented for light trapping, absorption and low-concentration sensing.

    • Yuerui Lu
    • , Songming Peng
    •  & Amit Lal
  • Article
    | Open Access

    Advanced biofuels with comparable properties to petroleum-based fuels could be microbially produced from lignocellulosic biomass. In this study,Escherichia coliis engineered to produce bisabolene, the immediate precursor of bisabolane, a biosynthetic alternative to D2 diesel.

    • Pamela P. Peralta-Yahya
    • , Mario Ouellet
    •  & Taek Soon Lee
  • Article |

    Protein microarrays are useful both in basic research and also in disease monitoring and diagnosis, but their dynamic range is limited. By using plasmonic gold substrates with near-infrared fluorescent enhancement, Tabakman et al. demonstrate a multiplexed protein array with improved detection limits and dynamic range.

    • Scott M. Tabakman
    • , Lana Lau
    •  & Hongjie Dai
  • Article
    | Open Access

    Secondary metabolites are widely used in human health and nutrition, but extraction yields from plants are often low. Nakagawaet al. have engineered the metabolism of Escherichia colito develop a fermentation system that produces plant alkaloids from simple carbon sources.

    • Akira Nakagawa
    • , Hiromichi Minami
    •  & Hidehiko Kumagai
  • Article
    | Open Access

    The control of cell fate and apoptosis is a continuing challenge in synthetic biology. In this study, systems are developed in which an intracellularly expressed genome-encoded protein simultaneously achieves up- and downregulation of two distinct apoptosis pathways.

    • Hirohide Saito
    • , Yoshihiko Fujita
    •  & Tan Inoue
  • Article |

    Hydrogen production using photosynthetic bacteria is an appealing energy source, but typically the bacteria require anaerobic conditions. Here, the authors report a wild-type cyanobacterium strain that shows very high rates of hydrogen production under aerobic environmental conditions.

    • Anindita Bandyopadhyay
    • , Jana Stöckel
    •  & Himadri B. Pakrasi
  • Article |

    Fluorescent proteins are widely used in molecular biology to visualize protein expression and localization. Here, Krizet al. describe an efficient and flexible modular plasmid-based eukaryotic expression cloning strategy for the homogeneous expression of several fluorescent proteins in one cell.

    • Andrijana Kriz
    • , Katharina Schmid
    •  & Philipp Berger
  • Article |

    Protein interactions in biological environments are expected to differ from the situationin vitro. In this study, a thermophoresis-based technique is described that allows the analysis of protein and small-molecule interactions in biological liquids; the work may allow more efficient drug development.

    • Christoph J. Wienken
    • , Philipp Baaske
    •  & Stefan Duhr
  • Article |

    When cultured as single cells, embryonic stem cells have low viability. Here, blebbistatin, a non-muscle myosin II inhibitor, is shown to enhance the cloning efficiency, viability and adhesion of both human embryonic stem cells and human induced pluripotent stem cellsin vitro.

    • Andrea Walker
    • , Hua Su
    •  & Noboru Sato
  • Article |

    Synthetic nanomotors convert chemical energy into motion. Here, they have been implemented in a motion-based assay that allows specific DNA and ribosomal RNA detection. The technique is fast, simple and sensitive, and the concentration-dependant distance signals of the magnetically aligned nanomotors are detected by optical microscopy.

    • Jie Wu
    • , Shankar Balasubramanian
    •  & Joseph Wang
  • Article |

    Spider silk adhesion is reliant on sticky droplets composed of glycoproteins surrounded by an aqueous coat. Sahni and co-workers show that these droplets behave as viscoelastic solids that enable large, rate-dependent adhesive forces capable of trapping fast- and slow-moving prey.

    • Vasav Sahni
    • , Todd A. Blackledge
    •  & Ali Dhinojwala